Package: mxfda
Title: A Functional Data Analysis Package for Spatial Single Cell Data
Version: 0.2.3
Date: 2025-02-19
Authors@R: 
    c(
    person("Julia", "Wrobel", role = c("aut"), 
    email = "julia.wrobel@emory.edu",
    comment = c(ORCID = "0000-0001-6783-1421")),
    person("Alex", "Soupir", role = c("aut", "cre"),
    comment = c(ORCID = "0000-0003-1251-9179"),
    email = "alex.soupir@moffitt.org")
    )
Description: Methods and tools for deriving spatial summary functions
        from single-cell imaging data and performing functional data
        analyses. Functions can be applied to other single-cell
        technologies such as spatial transcriptomics. Functional
        regression and functional principal component analysis methods
        are in the 'refund' package
        <https://cran.r-project.org/package=refund> while calculation
        of the spatial summary functions are from the 'spatstat'
        package <https://spatstat.org/>.
License: MIT + file LICENSE
URL: https://github.com/julia-wrobel/mxfda/,
        http://juliawrobel.com/mxfda/
BugReports: https://github.com/julia-wrobel/mxfda/issues/
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), tidyverse, survival,
        ggpubr, spatialTIME, tibble, broom, refund.shiny, Seurat,
        SeuratObject
Imports: magrittr, rlang, tidyr, purrr, dplyr, ggplot2, lifecycle,
        methods, stats, refund (>= 0.1-35), reshape2, mgcv,
        spatstat.geom, spatstat.explore, SpatEntropy, SimDesign
Depends: R (>= 2.10),
LazyData: true
LazyDataCompression: bzip2
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libx11-dev
Repository: https://julia-wrobel.r-universe.dev
Date/Publication: 2026-02-16 16:15:04 UTC
RemoteUrl: https://github.com/julia-wrobel/mxfda
RemoteRef: HEAD
RemoteSha: 0d0d924229d05df16450c2600bb78fc832621c60
NeedsCompilation: no
Packaged: 2026-06-17 08:07:07 UTC; root
Author: Julia Wrobel [aut] (ORCID: <https://orcid.org/0000-0001-6783-1421>),
  Alex Soupir [aut, cre] (ORCID: <https://orcid.org/0000-0003-1251-9179>)
Maintainer: Alex Soupir <alex.soupir@moffitt.org>